Human Dhhc20 Palmitoyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Human Dhhc20 Palmitoyltransferase
  Conformer 1
(PDB) 		6bmn (A)
  Conformer 2
(PDB) 		6bmn (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 254 0.33   16 - 85   106 - 293
2 20 0.31   86 - 105

Sequence


           _______________________________________________________________________________85_________________105___________________ 
 6bmn(A) : TLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTSASKT 
         :                                                                                                                          
 6bmn(B) : *LWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTSASKT 
           _______________________________________________________________________________85_________________105___________________ 

           ________________________________________________________________________________________________________________________ 
 6bmn(A) : IRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWT---tDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIES 
         :                                                                                                                          
 6bmn(B) : IRYCEKCQLIKPDRAHHCSACDSCILKMDHH-pWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIES 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________                                                                  
 6bmn(A) : FRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFSSLGDGCSFPTRL***                                                                  
         :                                                                                                                          
 6bmn(B) : FRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFSSLGDGCSFPTRLVGM                                                                  
           _______________________________________________________                                                                  

Morph
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.1
Translation
(A) 		0.0
Closure
(%) 		85.9
Bending Residues
( green ) 		  85 - 86
  105 - 106
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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