Osmoprotection Protein (Prox)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Osmoprotection Protein (Prox)
  Conformer 1
(PDB) 		1sw1 (A)
  Conformer 2
(PDB) 		1sw5 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 162 0.65   8 - 110   192 - 192   213 - 273
2 99 0.92   111 - 191   193 - 212

Sequence


           _____________________________________________________________________________________________________109________________ 
 1sw1(A) : ERVVIGSKPFNEQYILAN-iAILLEENGYKAEVKEGLGGTLVNYEALKRNDIQLYVEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGV 
         :                                                                                                                          
 1sw5(A) : ERVVIGSKPFNEQYILANMIAILLEENGYKAEVKEGLGGTLVNYEALKRNDIQLYVEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGV 
           _____________________________________________________________________________________________________109________________ 

           ______________________________________________________________190__________________211__________________________________ 
 1sw1(A) : EKISDLAEFADQLVFGSDPEFASRPDGLPQIKKVYGFEFKEVKQ-ePTL-yEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTAKDEKLISVLKLLEDRIDTDT 
         :                                                                                                                          
 1sw5(A) : EKISDLAEFADQLVFGSDPEFASRPDGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTAKDEKLISVLKLLEDRIDTDT 
           ______________________________________________________________190__________________211__________________________________ 

           ______________________________                                                                                           
 1sw1(A) : -rALNYQYDVEKKDAREIA-sFLKEQGLVK                                                                                           
         :                                                                                                                          
 1sw5(A) : MRALNYQYDVEKKDAREIAMSFLKEQGLVK                                                                                           
           ______________________________                                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		58.0
Translation
(A) 		-0.5
Closure
(%) 		98.5
Bending Residues
( green ) 		  109 - 112
  190 - 195
  211 - 214
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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