Propionate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Propionate Kinase
  Conformer 1
(PDB) 		3khy (A)
  Conformer 2
(PDB) 		3khy (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 229 0.45   89 - 93   142 - 373
2 140 0.44   4 - 88   94 - 141   374 - 382

Sequence


           ____________________________________________________________________________________88___93_____________________________ 
 3khy(A) : SEILVLNCGSSSVKFALINPHTSQSLVTGLAENIATKNCKVVFKAEHKIVKYLENGSYKDVFElKDFLVENKHLEKIVAIGHRVVHGGQYFSKSVLINADSLEKIKACIALAPLHNPAHI 
         :                                                                                                                          
 3khy(B) : SEILVLNCGSSSVKFALINPHTSQSLVTGLAENIATKNCKVVFKAEHKIVKYLENGSYKDVFElKDFLVENKHLEKIVAIGHRVVHGGQYFSKSVLINADSLEKIKACIALAPLHNPAHI 
           ____________________________________________________________________________________88___93_____________________________ 

           ________________141_____________________________________________________________________________________________________ 
 3khy(A) : EGIRFCQQIFPELPQVAVFDTAFHQTpSYIAEYAIPYELTHKHNIRKYGAHGTSHKYVSEQAAKILTQQKANVIVAHLGNGCSITAVVDGKSIDTSgLTPLDGLVgTRSGCIDPSIFAYI 
         :                                                                                                                          
 3khy(B) : EGIRFCQQIFPELPQVAVFDTAFHQTpSYIAEYAIPYELTHKHNIRKYGAHGTSHKYVSEQAAKILTQQKANVIVAHLGNGCSITAVVDGKSIDTSgLTPLDGLVgTRSGCIDPSIFAYI 
           ________________141_____________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3khy(A) : SDNLGWSVTEITNlNKQSGLLGICGHNDrEVSQLAAKGDSLAKLAIEIFSHRVAKFVASYiYFNKLDALVFTGGIGENAANIRKNIISKLANLGFiDHQKNSNSETFINSKNSHNIvIAT 
         :                                                                                                                          
 3khy(B) : SDNLGWSVTEITNlNKQSGLLGICGHNDrEVSQLAAKGDSLAKLAIEIFSHRVAKFVASYiYFNKLDALVFTGGIGENAANIRKNIISKLANLGFiDHQKNSNSETFINSKNSHNIvIAT 
           ________________________________________________________________________________________________________________________ 

           373__________                                                                                                            
 3khy(A) : NEELiAQETQNLI                                                                                                            
         :                                                                                                                          
 3khy(B) : NEELiAQETQNLI                                                                                                            
           373__________                                                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.1
Translation
(A) 		0.3
Closure
(%) 		80.4
Bending Residues
( green ) 		  88 - 91
  93 - 94
  141 - 142
  373 - 374
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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