Rec A

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Rec A
  Conformer 1
(PDB)
2reb (A)
  Conformer 2
(PDB)
1xp8 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 228 1.68   5 - 45   47 - 237   242 - 260   262 - 266
2 65 1.13   46 - 46   238 - 241   261 - 261   267 - 325

Sequence


           _________________________________________45_____________________________________________________________________________ 
 2reb(A) : DENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTG 
         :                                                                                                                          
 1xp8(A) : AKERSKAIETAMSQIEKAFGKGSIMKLGAESKLDVQVVSTGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNG 
           _________________________________________57_____________________________________________________________________________ 

           __________________________________________________________________________________235________241________________260___26 
 2reb(A) : EQALEICDALARSGAVDVIVVDSVAALTPKAEIEgLAARMMSQAMRKLAGNLKQSNTLLIFINQtGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYG 
         :                                                                                                                          
 1xp8(A) : EQALEIMELLVRSGAIDVVVVDSVAALTPRAEIpGLQARLMSQALRKLTAILSKTGTAAIFINQVgGRALKFYASVRLDVRKIG-----QPTvANTVKIKTVKNKVAAPFKEVELALVYG 
           __________________________________________________________________________________242________254________________273___27 

           6______________________________________________________________                                                          
 2reb(A) : EGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLL                                                          
         :                                                                                                                          
 1xp8(A) : KGFDQLSDLVGLAADMDIIKKAGSFYSYGDERIGQGKEKTIAYIAERPEMEQEIRDRVMAAIR                                                          
           9______________________________________________________________                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.5
Translation
(A)
0.8
Closure
(%)
72.1
Bending Residues
( green )
  45 - 47
  235 - 239
  241 - 242
  260 - 262
  266 - 267
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download