Probable Manganese-Dependent Inorganic Pyrophosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable Manganese-Dependent Inorganic Pyrophosphatase
  Conformer 1
(PDB) 		1i74 (A)
  Conformer 2
(PDB) 		1i74 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 184 0.38   3 - 190
2 116 0.41   191 - 307

Sequence


           ________________________________________________________________________________________________________________________ 
 1i74(A) : SKILVFGHQNPDSDAIGSSaYAYLKRQLGVDAQAVALGNPNEETAFVLDYFGIQAPPVVKSAQAEGAKQVILTDHNEFQQSIADIREVEVVEVVDHHRVANFETANPLYrLEPVGSASSI 
         :                                                                                                                          
 1i74(B) : SKILVFGHQNPDSDAIGSSaYAYLKRQLGVDAQAVALGNPNEETAFVLDYFGIQAPPVVKSAQAEGAKQVILTDHNEFQQSIADIREVEVVEVVDHHRVANFETANPLYrLEPVGSASSI 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________181______________________________________________________________ 
 1i74(A) : VYRLYKENGVAIPKEIAGVlSGLISDTLLLKSPTTHASDPAVAEDLAKIAGVDLQEYGLAlKAGTNLASKTAAQLVDIDAKTFELNGSQVRVAQVNTVDINEVLERQNEIEEAIKASQAA 
         :                                                                                                                          
 1i74(B) : VYRLYKENGVAIPKEIAGVlSGLISDTLLLKSPTTHASDPAVAEDLAKIAGVDLQEYGLAlKAGTNLASKTAAQLVDIDAKTFELNGSQVRVAQVNTVDINEVLERQNEIEEAIKASQAA 
           _______________________________________________________181______________________________________________________________ 

           ________________________________________________________________                                                         
 1i74(A) : NGYSDFVLiTDILNSNSEILALGNNTDKVEAAFNFTLKNNHAFLAGAVSRKKQVVPQLTESFNG                                                         
         :                                                                                                                          
 1i74(B) : NGYSDFVLiTDILNSNSEILALGNNTDKVEAAFNFTLKNNHAFLAGAVSRKKQVVPQLTESFNG                                                         
           ________________________________________________________________                                                         

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		16.8
Translation
(A) 		-1.1
Closure
(%) 		99.9
Bending Residues
( green ) 		  181 - 191
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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