Nadph: Adrenodoxin Oxidoreductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Nadph: Adrenodoxin Oxidoreductase
  Conformer 1
(PDB) 		1e6e (C)
  Conformer 2
(PDB) 		1e1l (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 275 0.93   38 - 42   48 - 58   102 - 335   337 - 342   349 - 352   433 - 436   440 - 446   450 - 453
2 174 0.51   9 - 37   43 - 47   59 - 101   336 - 336   343 - 348   353 - 432   437 - 439   447 - 449   454 - 457

Sequence


           _______________________________37___42___47_________58________________________________________101_______________________ 
 1e6e(C) : QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGRDVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSAR 
         :                                                                                                                          
 1e1l(A) : *TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGRDVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSAR 
           _______________________________37___42___47_________58________________________________________101_______________________ 

           ________________________________________________________________________________________________________________________ 
 1e6e(C) : AFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKR 
         :                                                                                                                          
 1e1l(A) : AFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKR 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________335____342___348_352____________ 
 1e6e(C) : LMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPIDPSVPFDPKLGVVPNMEGRVVDVPGLYC 
         :                                                                                                                          
 1e1l(A) : LMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPIDPSVPFDPKLGVVPNMEGRVVDVPGLYC 
           ________________________________________________________________________________________335____342___348_352____________ 

           _________________________________________________________________432_436_______446____453_______                         
 1e6e(C) : SGWVKRGPTGVITTTMTDSFLTGQILLQDLKAGHLPSGPRPGSAFIKALLDSRGVWPVSFSDWEKLDAEEVSRGQASGKPREKLLDPQEMLRLLGH                         
         :                                                                                                                          
 1e1l(A) : SGWVKRGPTGVITTTMTDSFLTGQILLQDLKAGHLPSGPRPGSAFIKALLDSRGVWPVSFSDWEKLDAEEVSRGQASGKPREKLLDPQEMLRLLGH                         
           _________________________________________________________________432_436_______446____453_______                         

Morph
Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.5
Translation
(A) 		0.6
Closure
(%) 		57.0
Bending Residues
( green ) 		  37 - 38
  42 - 43
  47 - 48
  58 - 59
  101 - 102
  335 - 338
  342 - 343
  348 - 349
  352 - 353
  432 - 433
  436 - 437
  439 - 440
  446 - 450
  453 - 457
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download