Proto-Oncogene Tyrosine-Protein Kinase Fyn

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Proto-Oncogene Tyrosine-Protein Kinase Fyn
  Conformer 1
(PDB) 		1g83 (A)
  Conformer 2
(PDB) 		1g83 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 99 0.4   145 - 243
2 58 0.46   87 - 144

Sequence


           _________________________________________________________144____________________________________________________________ 
 1g83(A) : TLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYK 
         :                                                                                                                          
 1g83(B) : TLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYK 
           _________________________________________________________144____________________________________________________________ 

           _________________________________________                                                                                
 1g83(A) : IRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVP                                                                                
         :                                                                                                                          
 1g83(B) : IRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVP                                                                                
           _________________________________________                                                                                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.5
Translation
(A) 		0.7
Closure
(%) 		65.4
Bending Residues
( green ) 		  144 - 148
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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