Quinolinate Acid Phosphoribosyl Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Quinolinate Acid Phosphoribosyl Transferase
  Conformer 1
(PDB) 		1qpo (F)
  Conformer 2
(PDB) 		1qpr (E)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 116 0.27   2614 - 2618   2623 - 2633   2638 - 2654   2659 - 2660   2666 - 2670   2698 - 2766   2771 - 2777
2 135 0.49   2506 - 2613   2619 - 2622   2634 - 2637   2655 - 2658   2661 - 2665   2767 - 2770   2778 - 2783
3 27 0.42   2671 - 2697

Sequence


           ____________________________________________________________________________________________________________2613_____262 
 1qpo(F) : GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATAT 
         :                                                                                                                          
 1qpr(E) : GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATAT 
           _____________________________________________________________________________________________________________113_117__12 

           2_______2633_________________2654_______2665____________________________2697____________________________________________ 
 1qpo(F) : AAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAP 
         :                                                                                                                          
 1qpr(E) : AAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAP 
           2________133_137______________154_158____165_____________________________197____________________________________________ 

           _____________________2766______2776_________                                                                             
 1qpo(F) : TVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM                                                                             
         :                                                                                                                          
 1qpr(E) : TVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM                                                                             
           ______________________266_270___276_________                                                                             

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.0
Translation
(A) 		0.0
Closure
(%) 		78.8
Bending Residues
( green ) 		  2613 - 2614
  2617 - 2619
  2622 - 2623
  2633 - 2634
  2637 - 2638
  2654 - 2655
  2658 - 2661
  2665 - 2666
  2766 - 2767
  2770 - 2771
  2776 - 2778
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		6.8
Translation
(A) 		-0.3
Closure
(%) 		37.8
Bending Residues
( green ) 		  2667 - 2671
  2697 - 2698
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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