Ectonucleoside Triphosphate Diphosphohydrolase I

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ectonucleoside Triphosphate Diphosphohydrolase I
  Conformer 1
(PDB)
3aap (A)
  Conformer 2
(PDB)
4bra (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 232 0.64   122 - 123   157 - 384   390 - 391
2 117 0.68   43 - 121   124 - 156   385 - 389

Sequence


           ___________________________________________________________________________________121________________________________15 
 3aap(A) : *****KHSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLTMLLADAPIHNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTIT 
         :                                                                                                                          
 4bra(A) : TNPCEKHSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLTMLLADAPIHNIPVYFYATAGMRLLPQSQQKKYYDELDYWFRQQSQWQLVEAKTIT 
           ___________________________________________________________________________________121________________________________15 

           6_______________________________________________________________________________________________________________________ 
 3aap(A) : GNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLNSPSCFANDYPLPDGESGQGNAPSCKEEVTSLMNSV 
         :                                                                                                                          
 4bra(A) : GNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLNSPSCFANDYPLPDGESGQGNAPSCKEEVTSLMNSV 
           6_______________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________________379_______389____   
 3aap(A) : HKVNQQIQPLLALNPVNEWYSIGGISNLASSQLFHFENSELTNQSLLQQGDNQICHQQWDILNGQYPDDEYLYQYCLLSSYYYALMVDGYGINPNQTIHYIPPEQNLDWTIGVVLHRA   
         :                                                                                                                          
 4bra(A) : HKVNQQIQPLLALNPVNEWYSIGGISNLASSQLFHFENSELTNQSLLQQGDNQICHQQWDILNGQYPDDEYLYQYCLLSSYYYALMVDGYGINPNQTIHYIPPEQNLDWTIGVVLHRA   
           _____________________________________________________________________________________________________379_______389____   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.2
Translation
(A)
0.8
Closure
(%)
97.4
Bending Residues
( green )
  121 - 127
  156 - 157
  379 - 385
  389 - 391
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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