Hth-Type Transcriptional Regulator Cuer

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hth-Type Transcriptional Regulator Cuer
  Conformer 1
(PDB) 		4wls (A)
  Conformer 2
(PDB) 		4wlw (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 66 0.52   4 - 70
2 38 2.66   71 - 109

Sequence


           ________________________________________________________________68______________________________________________________ 
 4wls(A) : NISDVAKITGLTSKAIRFYEEKGLVTPPrSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSrDQLLALANA************ 
         :                                                                                                                          
 4wlw(A) : NISDVAKITGLTSKAIRFYEEKGLVTPPrSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSrDQLLALANACPGDDSADCPII 
           ________________________________________________________________68______________________________________________________ 

           _______                                                                                                                  
 4wls(A) : *******                                                                                                                  
         :                                                                                                                          
 4wlw(A) : ENLSGCC                                                                                                                  
           _______                                                                                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		28.4
Translation
(A) 		-2.3
Closure
(%) 		7.3
Bending Residues
( green ) 		  68 - 71
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download