Ig-Like Domain-Containing Protein Dkfzp686o24166/dkfzp686i21167

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ig-Like Domain-Containing Protein Dkfzp686o24166/dkfzp686i21167
  Conformer 1
(PDB)
3pv6 (A)
  Conformer 2
(PDB)
6yjp (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 119 0.89   28 - 141   143 - 147
2 88 1.08   142 - 142   148 - 242

Sequence


           ____________________________________________________________________________________________________________________141_ 
 3pv6(A) : *ADLKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVAS 
         :                                                                                                                          
 6yjp(C) : TGDLKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVAS 
           ____________________________________________________________________________________________________________________141_ 

           _________________________________________________________________________________________________________                
 3pv6(A) : PASRLLL--------eDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTL**                
         :                                                                                                                          
 6yjp(C) : PASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSSLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTGTH                
           _________________________________________________________________________________________________________                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.1
Translation
(A)
-0.1
Closure
(%)
7.8
Bending Residues
( green )
  141 - 159
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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