Chitinase C

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chitinase C
  Conformer 1
(PDB)
1wvv (B)
  Conformer 2
(PDB)
2dbt (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 130 0.35   92 - 105   109 - 153   222 - 292
2 71 0.44   106 - 108   154 - 221

Sequence


           ___________________________________________________________103_______________________________________________153________ 
 1wvv(B) : CATAWSSSSVYTNGGTVSYNGRNYTAKWWTQNERPGTSDVWADKGACGgFVVSEAQFNQMFPNRNAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTGGLFYIKEVNEAN 
         :                                                                                                                          
 2dbt(C) : ************************************************GFVVSEAQFNQMFPNRNAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHETGGLFYIKEVNEAN 
           ___________________________________________________________103_______________________________________________153________ 

           _________________________________________________________221____________________________________________________________ 
 1wvv(B) : YPHYCDTTQSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGLWYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFT 
         :                                                                                                                          
 2dbt(C) : YPHYCDTTQSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGLWYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFT 
           _________________________________________________________221____________________________________________________________ 

           _____________                                                                                                            
 1wvv(B) : QILGTTTGPNLSC                                                                                                            
         :                                                                                                                          
 2dbt(C) : QILGTTTGPNLSC                                                                                                            
           _____________                                                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.0
Translation
(A)
0.4
Closure
(%)
99.2
Bending Residues
( green )
  103 - 110
  153 - 154
  221 - 223
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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