Cytosine Deaminase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cytosine Deaminase
  Conformer 1
(PDB)
1ra0 (A)
  Conformer 2
(PDB)
1r9z (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 387 0.13   6 - 68   97 - 315   320 - 424
2 32 0.89   69 - 96   316 - 319

Sequence


           ___________________________________________________________64__________________________92_______________________________ 
 1ra0(A) : ALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHV 
         :                                                                                                                          
 1r9z(A) : ALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHV 
           ___________________________________________________________64__________________________92_______________________________ 

           ________________________________________________________________________________________________________________________ 
 1ra0(A) : DVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVT 
         :                                                                                                                          
 1r9z(A) : DVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVT 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________________314_________________________________________________ 
 1ra0(A) : ASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNL 
         :                                                                                                                          
 1r9z(A) : ASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDSVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNL 
           ____________________________________________________________________314_________________________________________________ 

           _______________________________________________________________                                                          
 1ra0(A) : QDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR                                                          
         :                                                                                                                          
 1r9z(A) : QDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR                                                          
           _______________________________________________________________                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.7
Translation
(A)
0.2
Closure
(%)
93.4
Bending Residues
( green )
  64 - 69
  92 - 99
  314 - 323
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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