Inducible Nitric Oxide Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Inducible Nitric Oxide Synthase
  Conformer 1
(PDB)
1noc (A)
  Conformer 2
(PDB)
1vaf (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 344 6.44   118 - 428   461 - 493
2 23 5.99   429 - 460

Sequence


           ________________________________________________________________________________________________________________________ 
 1noc(A) : ***************************************PKSLTRGPRDKPTPLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIG 
         :                                                                                                                          
 1vaf(A) : QYVRIKNWGSGEILHDTLHHKATSDFTCKSKSCLGSIMNPKSLTRGPRDKPTPLEELLPHAIEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1noc(A) : RIQWSNLQVFDARNCSTAQEMFQHICRHILYATNNGNIRSAITVFPQRSDGKHDFRLWNSQLIRYAGYQMPDGTIRGDAATLEFTQLCIDLGWKPRYGRFDVLPLVLQADGQDPEVFEIP 
         :                                                                                                                          
 1vaf(A) : RIQWSNLQVFDARNCSTAQEMFQHICRHILYATNNGNIRSAITVFPQRSDGKHDFRLWNSQLIRYAGYQMPDGTIRGDAATLEFTQLCIDLGWKPRYGRFDVLPLVLQADGQDPEVFEIP 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________________________428________ 
 1noc(A) : PDLVLEVTMEHPKYEWFQELGLKWYALPAVANMLLEVGGLEFPACPFNGWYMGTEIGVRDFCDTQRYNILEEVGRRMGLETHTLASLWKDRAVTEINVAVLHSFQKQNVTIMDHHTASES 
         :                                                                                                                          
 1vaf(A) : PDLVLEVTMEHPKYEWFQELGLKWYALPAVANMLLEVGGLEFPACPFNGWYMGTEIGVRDFCDTQRYNILEEVGRRMGLETHTLASLWKDRAVTEINVAVLHSFQKQNVTIMDHHTASES 
           _____________________________________________________________________________________________________________428________ 

           ____________________459_____________________________________                                                             
 1noc(A) : FMKHMQNEYRAR---------lVPPVSGSITPVFHQEMLNYVLSPFYYYQIEPWKTHIWQ                                                             
         :                                                                                                                          
 1vaf(A) : FMKHMQNEYRARGGCPADWIWLVPPVSGSITPVFHQEMLNYVLSPFYYYQIEPWKTHIW*                                                             
           ____________________459_____________________________________                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
62.3
Translation
(A)
3.2
Closure
(%)
90.4
Bending Residues
( green )
  428 - 429
  459 - 479
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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