O-Acetylserine Sulfhydrylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name O-Acetylserine Sulfhydrylase
  Conformer 1
(PDB) 		1fcj (A)
  Conformer 2
(PDB) 		1d6s (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 239 0.69   3 - 62   68 - 87   142 - 300
2 59 0.77   63 - 67   88 - 141

Sequence


           ________________________________________________________58_______67_____________________________________________________ 
 1fcj(A) : SKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMK 
         :                                                                                                                          
 1d6s(A) : SKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVACRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMK 
           ________________________________________________________58_______67_____________________________________________________ 

           __________________141___________________________________________________________________________________________________ 
 1fcj(A) : GAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDL 
         :                                                                                                                          
 1d6s(A) : GAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDL 
           __________________141___________________________________________________________________________________________________ 

           __________________________________________________________________________________                                       
 1fcj(A) : KLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSG********************                                       
         :                                                                                                                          
 1d6s(A) : KLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ                                       
           __________________________________________________________________________________                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		17.1
Translation
(A) 		-0.2
Closure
(%) 		72.8
Bending Residues
( green ) 		  58 - 63
  67 - 88
  141 - 142
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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