Sialyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sialyltransferase
  Conformer 1
(PDB) 		4v2u (A)
  Conformer 2
(PDB) 		4v3c (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 248 1.52   0 - 221   305 - 308   348 - 349   351 - 371   373 - 373
2 131 2.27   222 - 304   309 - 344   350 - 350   372 - 372   374 - 383

Sequence


           ________________________________________________________________________________________________________________________ 
 4v2u(A) : SKTITIYLDPASLPTLNQLMHFTKESEDKETARIFGFSR--lPEKITEQYNNIHFVEIKNNRPTEDIFTILDQYPEKLELDLHLNIAHSIQLFHPILQYRFKHPDRISIKSLNLYDDGTM 
         :                                                                                                                          
 4v3c(A) : SKTITIYLDHASLPTLNQLMHFTKESEDKETARIFGFSRFKLPEKITEQYNNIHFVEIKNNRPTEDIFTILDQYPEKLELDLHLNIAHSIQLFHPILQYRFKHPDRISIKSLNLYDDGTA 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________________221________________ 
 4v2u(A) : EYVDLEKEENKDIKSAIKKAEKQLSDYLLTGKINFDNPTLARYVWQSQYPVKYHFLSTEYFEKAEFLQPLKTYLAGKYQKMDWSAYEKLSPEQQTFYLKLVGFSDETKQLFHTEQTKFIF 
         :                                                                                                                          
 4v3c(A) : EYVDLEKEENKDIKSAIKKAEKQLSDYLLTGKINFDNPTLARYVWQSQYPVKYHFLSTEYFEKAEFLQPLKTYLAGKYQKMDWSAYEKLSPEQQTFYLKLVGFSDETKQLFHTEQTKFIF 
           _____________________________________________________________________________________________________221________________ 

           ________________________________________________________________304_____________________________________344_____________ 
 4v2u(A) : TGTTTWEGNTDIREYYAKQQLNLLKHFTHSEGDLFIGDQYKIYFKGHPRGGDINDYILKHAKDITNIPANISFEILMMTGLLPDKVGGVASSLYFSLPKEKISHIIFTSNKKIKNKEDAL 
         :                                                                                                                          
 4v3c(A) : TGTTTWEGNTDIREYYAKQQLNLLKHFTHSEGDLFIGDQYKIYFKGHPRGGDINDYILKHAKDITNIPANISFEILMMTGLLPDKVGGVASSLYFSLPKEKISHIIFTSNKKIKNKEDAL 
           ________________________________________________________________304_____________________________________344_____________ 

           ___________371______________                                                                                             
 4v2u(A) : NDPYVRVMLRLGMIDKSQIIFWDSLKQL                                                                                             
         :                                                                                                                          
 4v3c(A) : NDPYVRVMLRLGMIDKSQIIFWDSLKQL                                                                                             
           ___________371______________                                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		26.9
Translation
(A) 		-0.9
Closure
(%) 		100.0
Bending Residues
( green ) 		  221 - 222
  304 - 309
  344 - 369
  371 - 374
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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