Threonine Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Threonine Synthase
  Conformer 1
(PDB) 		2d1f (A)
  Conformer 2
(PDB) 		2d1f (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 257 0.37   13 - 15   20 - 27   31 - 75   88 - 88   95 - 109   152 - 156   161 - 340
2 71 0.44   16 - 19   28 - 30   76 - 87   89 - 94   110 - 151   157 - 160

Sequence


           ____15__19____25___30___________________________________________75__________87_____94____________109____________________ 
 2d1f(A) : QPWPGVIAAYRDRLPVGDDWTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQRAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAV 
         :                                                                                                                          
 2d1f(B) : QPWPGVIAAYRDRLPVGDDWTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQRAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAV 
           ____15__19____25___30___________________________________________75__________87_____94____________109____________________ 

           ___________________151__156_160_________________________________________________________________________________________ 
 2d1f(A) : MHGAKIIQIDGNFDDCLELARKMAADFPTISLVNSVNPVRIEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATA 
         :                                                                                                                          
 2d1f(B) : MHGAKIIQIDGNFDDCLELARKMAADFPTISLVNSVNPVRIEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATA 
           ___________________151__156_160_________________________________________________________________________________________ 

           _____________________________________________________________________________________________________________            
 2d1f(A) : IRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTALKDMPSVSPVPVDPVAVVEKLG            
         :                                                                                                                          
 2d1f(B) : IRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTALKDMPSVSPVPVDPVAVVEKLG            
           _____________________________________________________________________________________________________________            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.3
Translation
(A) 		-0.1
Closure
(%) 		99.0
Bending Residues
( green ) 		  15 - 16
  19 - 20
  25 - 28
  30 - 31
  75 - 76
  87 - 89
  94 - 95
  109 - 110
  151 - 152
  156 - 157
  160 - 161
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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