Udp-Glcnac C6 Dehydratase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Glcnac C6 Dehydratase
  Conformer 1
(PDB) 		2gna (A)
  Conformer 2
(PDB) 		2gn4 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 279 0.57   11 - 173   197 - 199   206 - 238   245 - 246   251 - 327   331 - 331
2 42 0.82   174 - 196   200 - 205   239 - 244   247 - 250   328 - 330

Sequence


           ________________________________________________________________________________________________________________________ 
 2gna(A) : QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS 
         :                                                                                                                          
 2gn4(B) : **MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________170_______________________196______205______________________________238___244 
 2gna(A) : QVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAK 
         :                                                                                                                          
 2gn4(B) : QVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAK 
           ___________________________________________170_______________________196______205______________________________238___244 

           ___250__________________________________________________________________________327______                                
 2gna(A) : ALAPNTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHNNNQWLEPDDLLKLL                                
         :                                                                                                                          
 2gn4(B) : ALAPNTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHNNNQWLEPDDLLKLL                                
           ___250__________________________________________________________________________327______                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.9
Translation
(A) 		0.6
Closure
(%) 		94.6
Bending Residues
( green ) 		  170 - 174
  196 - 197
  199 - 200
  205 - 206
  238 - 239
  244 - 248
  250 - 252
  327 - 328
  330 - 331
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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