Prfa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Prfa
  Conformer 1
(PDB) 		2bgc (I)
  Conformer 2
(PDB) 		2bgc (D)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 167 0.96   6 - 132   150 - 160   162 - 186   205 - 206   224 - 234
2 51 0.53   133 - 149   161 - 161   189 - 204   207 - 223

Sequence


           ________________________________________________________________________________________________________________________ 
 2bgc(I) : NAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQ 
         :                                                                                                                          
 2bgc(D) : *AQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQ 
           ________________________________________________________________________________________________________________________ 

           _______131_______________149________160_______________________186_______________204________________223_____________      
 2bgc(I) : KQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLApATWGKLN      
         :                                                                                                                          
 2bgc(D) : KQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQELG--------sAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLApATWGKLN      
           _______131_______________149________160_______________________186_______________204________________223_____________      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.5
Translation
(A) 		0.2
Closure
(%) 		87.4
Bending Residues
( green ) 		  131 - 133
  149 - 150
  160 - 162
  186 - 192
  204 - 207
  223 - 224
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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