Amine Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Amine Dehydrogenase
  Conformer 1
(PDB) 		7zbo (C)
  Conformer 2
(PDB) 		7zbo (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 265 0.27   10 - 169   204 - 233   263 - 277   290 - 349
2 71 0.99   170 - 203   234 - 262   278 - 289

Sequence


           ________________________________________________________________________________________________________________________ 
 7zbo(C) : SPLRVALYGFGNQNKEMAKMLVERKDVEIVAVISNKSNVGKDFGEVIGLAPQGILVTAGLDAAETLRTTNPQIAMLSTLSTVGDIESQLRACAENKVNVYTIAEELTFSWTSAPEKTKEM 
         :                                                                                                                          
 7zbo(D) : SPLRVALYGFGNQNKEMAKMLVERKDVEIVAVISNKSNVGKDFGEVIGLAPQGILVTAGLDAAETLRTTNPQIAMLSTLSTVGDIESQLRACAENKVNVYTIAEELTFSWTSAPEKTKEM 
           ________________________________________________________________________________________________________________________ 

           ______________________________________168_______________________198________________________225__________________________ 
 7zbo(C) : DELFKEHNVSLIGGGFLDGACCDMARTMAAMMHKIDKLDGGLQYNVDHYGQVLAIAHGVGLfYAENGPGWTSPTSYPKSYVYNMNDWFASAFGLTVIKTEEVKTPTKAPIELYSEAIGRA 
         :                                                                                                                          
 7zbo(D) : DELFKEHNVSLIGGGFLDGACCDMARTMAAMMHKIDKLDGGLQYNVDHYGQVLAIAHGVGLSyAENGPGWTSPTSYPKSYVYNMNDWFASAFGLTVIKTEEVKTPTKAPIELYSEAIGRA 
           ______________________________________168_______________________198________________________225__________________________ 

           ________262___________276__________289______________________________________________________________                     
 7zbo(C) : IPVGQCTGMIVTATTTTEEGVIIVEKQVGKCYEDGDEDMVFMNLEGNPTGGVGFTMKNPPTPAMTNTIAISRMFQTVDAPAGYITTDKLPTMEAYVHGRL                     
         :                                                                                                                          
 7zbo(D) : IPVGQCTGMIVTATTTTEEGVIIVEKQVGKCYEDGDEDMVFMNLEGNPTGGVGFTMKNPPTPAMTNTIAISRMFQTVDAPAGYITTDKLPTMEAYVHGRL                     
           ________262___________276__________289______________________________________________________________                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		17.0
Translation
(A) 		-0.8
Closure
(%) 		98.3
Bending Residues
( green ) 		  168 - 170
  198 - 207
  225 - 234
  262 - 265
  276 - 278
  289 - 291
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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