Imine Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Imine Reductase
  Conformer 1
(PDB)
5g6r (A)
  Conformer 2
(PDB)
5g6s (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 164 0.31   5 - 168
2 120 0.97   169 - 288

Sequence


           ________________________________________________________________________________________________________________________ 
 5g6r(A) : *KHIGIFGLGAMGTALAAKYLEHGYKTSVWNRTTAKAIPLVEQGAKLASTISEGVNANDLIIICLLNNQVVEDALRDALQTLPSKTIVNLTNGTPNQARKLADFVTSHGARYIHGGIMAV 
         :                                                                                                                          
 5g6s(A) : SKHIGIFGLGAMGTALAAKYLEHGYKTSVWNRTTAKAIPLVEQGAKLASTISEGVNANDLIIICLLNNQVVEDALRDALQTLPSKTIVNLTNGTPNQARKLADFVTSHGARYIHGGIMAV 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________168_________________________________________________________________________ 
 5g6r(A) : PTMIGSPHAVLLYSGESLELFQSIESHLSLLGMSKYLGTDAGSASLHDLALLSGMYGLFSGFLHAVALIKSGQDTSTTATGLLPLLTPWLSAMTGYLSSIAKQIDDGDYATQGSNLGMQL 
         :                                                                                                                          
 5g6s(A) : PTMIGSPHAVLLYSGESLELFQSIESHLSLLGMSKYLGTDAGSASLHDLALLSGMYGLFSGFLHAVALIKSGQDTSTTATGLLPLLTPWLSAMTGYLSSIAKQIDDGDYATQGSNLGMQL 
           ____________________________________________168_________________________________________________________________________ 

           _________________________________________________                                                                        
 5g6r(A) : AGVENIIRAGEEQRVSSQMILPIKALIEQAVGEGHGGEDLSALIEYFKV                                                                        
         :                                                                                                                          
 5g6s(A) : AGVENIIRAGEEQRVSSQMILPIKALIEQAVGEGHGGEDLSALIEYFKV                                                                        
           _________________________________________________                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.1
Translation
(A)
0.5
Closure
(%)
90.5
Bending Residues
( green )
  168 - 169
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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