Probable 2-Dehydropantoate 2-Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable 2-Dehydropantoate 2-Reductase
  Conformer 1
(PDB) 		5zik (C)
  Conformer 2
(PDB) 		6k1r (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 183 0.75   75 - 88   94 - 111   120 - 125   127 - 127   142 - 152   169 - 301
2 116 0.92   3 - 74   89 - 93   112 - 119   126 - 126   128 - 141   153 - 168

Sequence


           __________________________________________________________________________74____________88___93_______________111_____11 
 5zik(C) : **MTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRS 
         :                                                                                                                          
 6k1r(A) : SHMTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRS 
           __________________________________________________________________________74____________88___93_______________111_____11 

           9___125___________139__________152_____________168______________________________________________________________________ 
 5zik(C) : RCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVR 
         :                                                                                                                          
 6k1r(A) : RCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVR 
           9___125___________139__________152_____________168______________________________________________________________________ 

           _________________________________________________________________                                                        
 5zik(C) : AVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGLPDR                                                        
         :                                                                                                                          
 6k1r(A) : AVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGLPDR                                                        
           _________________________________________________________________                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.9
Translation
(A) 		-0.1
Closure
(%) 		95.9
Bending Residues
( green ) 		  74 - 75
  88 - 89
  93 - 94
  111 - 112
  119 - 120
  125 - 128
  139 - 144
  152 - 153
  168 - 169
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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