Propionate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Propionate Kinase
  Conformer 1
(PDB) 		3khy (A)
  Conformer 2
(PDB) 		1g99 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 228 1.63   92 - 95   142 - 373
2 140 2.14   4 - 91   96 - 141   374 - 382

Sequence


           ________________________________________________________________________________________________91__95__________________ 
 3khy(A) : SEILVLNCGSSSVKFALINPHTSQSLVTGLAENIATKNCKVVFKAE--HKIVKYLENGSYKDVFE-----lKD--FLVENKHLEKIVAIGHRVVHGGQYFSKSVLINADSLEKIKACIAL 
         :                                                                                                                          
 1g99(A) : MKVLVINAGSSSLKYQLIDMTNESALAVGLCERIGIDNSIITQKKFDGKKLEKLTDLPTHKDALEEVVKALTDDEFGV-IKDMGEINAVGHRVVHGGEKFTTSALYDEGVEKAIKDCFEL 
           ________________________________________________________________________________________________97_101__________________ 

           _________________________141____________________________________________________________________________________________ 
 3khy(A) : APLHNPAHIEGIRFCQQIFPELPQVAVFDTAFHQT-pSYIAEYAIPYELTHKHNIRKYGAHGTSHKYVSEQAAKILTQ--QKANVIVAHLGNGCSITAVVDGKSIDTS-gLTPLDGL-Vg 
         :                                                                                                                          
 1g99(A) : APLHNPPNMMGISACAEIMPGTPMVIVFDTAFHQTMPPYAYMYALPYDLYEKHGVRKYGFHGTSHKYVAERAALMLGKPAEETKIITCHLGNGSSITAVEGGKSVETSMGFTPLEGLAMG 
           _________________________147____________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3khy(A) : TRSGCIDPSIFAYISDNLGWSVTEITNl-NKQSGLLGICG-HND-rEVSQLAAKGDSLAKLAIEIFSHRVAKFVASY-iYFNKLDALVFTGGIGENAANIRKNIISKLANLGF-iDHQKN 
         :                                                                                                                          
 1g99(A) : TRCGSIDPAIVPFLMEKEGLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKN 
           ________________________________________________________________________________________________________________________ 

           _______________________373_____________                                                                                  
 3khy(A) : S--NSETFINSKNSHN--IvIATNEEL-iAQETQNLI**                                                                                  
         :                                                                                                                          
 1g99(A) : KIRGQEIDISTPDAKVRVFVIPTNEELAIARETKEIVET                                                                                  
           _______________________385_____________                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		18.9
Translation
(A) 		0.5
Closure
(%) 		47.0
Bending Residues
( green ) 		  91 - 92
  95 - 96
  141 - 142
  373 - 374
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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