Putative Ornithine Carbamoyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Ornithine Carbamoyltransferase
  Conformer 1
(PDB) 		1js1 (X)
  Conformer 2
(PDB) 		2fg7 (X)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 100 0.64   4 - 6   23 - 69   95 - 114   126 - 142   144 - 145   305 - 315
2 187 0.37   7 - 22   115 - 125   143 - 143   146 - 304
3 25 2.41   70 - 94

Sequence


           ________6____________20______________________________________________68________________________94_________________114___ 
 1js1(X) : ***MKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFEN 
         :                                                                                                                          
 2fg7(X) : GSHMKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFEN 
           ________6____________20______________________________________________68________________________94_________________114___ 

           ______________________142_______________________________________________________________________________________________ 
 1js1(X) : REYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKN 
         :                                                                                                                          
 2fg7(X) : REYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKN 
           ______________________142_______________________________________________________________________________________________ 

           ________________________________________________________________304____________________                                  
 1js1(X) : WAAYTGDNYGQILSTDRNWTVGDRQMAVTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLENLPHHHHHH                                  
         :                                                                                                                          
 2fg7(X) : WAAYLGDNYGQILSTDRNWTVGDRQMAVTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLENLP******                                  
           ________________________________________________________________304____________________                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.1
Translation
(A) 		0.1
Closure
(%) 		82.6
Bending Residues
( green ) 		  6 - 8
  20 - 23
  114 - 128
  142 - 146
  304 - 305
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		23.7
Translation
(A) 		0.3
Closure
(%) 		31.8
Bending Residues
( green ) 		  68 - 70
  94 - 99
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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