Basic Fibroblast Growth Factor Receptor 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Basic Fibroblast Growth Factor Receptor 1
  Conformer 1
(PDB) 		3gqi (A)
  Conformer 2
(PDB) 		7vjl (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 166 1.51   539 - 544   564 - 639   665 - 761
2 92 1.38   467 - 538   545 - 563   640 - 664

Sequence


           ________________________________________________________________________538___544________________563____________________ 
 3gqi(A) : ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEF 
         :                                                                                                                          
 7vjl(A) : *LPLDPLWEFPRDRLVLGKPLGEG--gQVVRAEAFGMDPARPDQASTVAVKML-dNAS--dLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPg--- 
           ________________________________________________________________________527___533________________552____________________ 

           _____________________________________________________639________________________________________________________________ 
 3gqi(A) : SFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDkKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 
         :                                                                                                                          
 7vjl(A) : ---P-------LSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFG-----------------pVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIP 
           _____________________________________________________628________________________________________________________________ 

           ________________________________________________________________                                                         
 3gqi(A) : VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQElDLS                                                         
         :                                                                                                                          
 7vjl(A) : VEELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALDKVLLAVSEE*****                                                         
           ________________________________________________________________                                                         

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		16.6
Translation
(A) 		-0.1
Closure
(%) 		88.2
Bending Residues
( green ) 		  538 - 539
  544 - 545
  563 - 564
  639 - 665
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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