P2x Purinoceptor 7

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name P2x Purinoceptor 7
  Conformer 1
(PDB) 		6u9v (C)
  Conformer 2
(PDB) 		6u9w (C)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 195 1.59   49 - 108   175 - 294   313 - 332
2 272 1.44   8 - 48   333 - 592
3 73 1.43   112 - 170   295 - 308

Sequence


           __________________________________________47__________________________________________________________108_______________ 
 6u9v(C) : CCSWNDVFQYETNKVTRIQSVNYGTIKWILHMTVFSYVSFALMSDKLYQRKEPLISSVHTKVKGVAEVTENVt-----KLVHGIFDTADYTLPLQGNSFFVMTNYLKSEGQEQKLCPEYP 
         :                                                                                                                          
 6u9w(C) : *CSWNDVFQYETNKVTRIQSVNYGTIKWILHMTVFSYVSFALMSDKLYQRKEPLISSVHTKVKGVAEVTENVTEGGVTKLVHGIFDTADYTLPLQGNSFFVMTNYLKSEGQEQKLCPEYP 
           __________________________________________47__________________________________________________________108_______________ 

           ____________________________________________170_________________________________________________________________________ 
 6u9v(C) : SRGKQCHSDQGCIKGWMDPQSKGIQTGRCIPYDQKRKTCEIFAWCPAEEGKEAPRPALLRSAENFTVLIKNNIDFPGHNYTTRNILPGMNISCTFHKTWNPQCPIFRLGDIFQEIGENFT 
         :                                                                                                                          
 6u9w(C) : SRGKQCHSDQGCIKGWMDPQSKGIQTGRCIPYDQKRKTCEIFAWCPAEEGKEAPRPALLRSAENFTVLIKNNIDFPGHNYTTRNILPGMNISCTFHKTWNPQCPIFRLGDIFQEIGENFT 
           ____________________________________________170_________________________________________________________________________ 

           ________________________________________________294___________308_____________________332_______________________________ 
 6u9v(C) : EVAVQGGIMGIEIYWDCNLDSWSHRCQPKYSFRRLDDKYTNESLFPGYNFRYAKYYKENGMEKRTLIKAFGVRFDILVFGTGGKFDIIQLVVYIGSTLSYFGLATVCIDLIINTYASTCC 
         :                                                                                                                          
 6u9w(C) : EVAVQGGIMGIEIYWDCNLDSWSHRCQPKYSFRRLDDKYTNESLFPGYNFRYAKYYKENGMEKRTLIKAFGVRFDILVFGTGGKFDIIQLVVYIGSTLSYFGLATVCIDLIINTYASTCC 
           ________________________________________________294___________308_____________________332_______________________________ 

           ________________________________________________________________________________________________________________________ 
 6u9v(C) : RSRVYPSCKCCEPCAVNEYYYRKKCEPIVEPKPTLKYVSFVDEPHIWMVDQQLLGKSLQDVKGQEVPRPQTDFLELSRLsRDSPDWCQCGNCLPSQLPENRRALEELCCRRKPGQCITTS 
         :                                                                                                                          
 6u9w(C) : RSRVYPSCKCCEPCAVNEYYYRKKCEPIVEPKPTLKYVSFVDEPHIWMVDQQLLGKSLQDVKGQEVPRPQTDFLELSRL--dSPDWCQCGNCLPSQLPENRRALEELCCRRKPGQCITTS 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________                                    
 6u9v(C) : ELFSKIVLSREALQLLLLYQEPLLALEGEAINSKLRHCAYRSYATWRFVSQDMADFAILPSCCRWKIRKEFPKTQGQYSGFKYPY                                    
         :                                                                                                                          
 6u9w(C) : ELFSKIVLSREALQLLLLYQEPLLALEGEAINSKLRHCAYRSYATWRFVSQDMADFAILPSCCRWKIRKEFPKTQGQYSGFKYPY                                    
           _____________________________________________________________________________________                                    

Morph
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.2
Translation
(A) 		-1.1
Closure
(%) 		91.7
Bending Residues
( green ) 		  47 - 49
  332 - 334
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		18.0
Translation
(A) 		1.6
Closure
(%) 		96.9
Bending Residues
( green ) 		  108 - 112
  170 - 175
  294 - 295
  308 - 313
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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