R.mvai

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name R.mvai
  Conformer 1
(PDB) 		2oaa (A)
  Conformer 2
(PDB) 		2oa9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 150 2.23   2 - 4   68 - 162   188 - 239
2 90 5.88   5 - 67   163 - 187   240 - 244

Sequence


           ____2_______________________________________________________________67__________________________________________________ 
 2oaa(A) : **SMSEYLNLLKEAIQNVVDGGWHETKRKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHETAAKSLLTLFTKSPTNPRGANTMLRNRYGKKDEYGNNILHQTVSGNRKTNSNSYNYD 
         :                                                                                                                          
 2oa9(A) : MKSMSEYLNLLKEAIQNVVDGGWHETKR---tGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHETAAKSLLTLFTKSPTNPRGANTMLRNRYGKKDEYGNNILHQTVSGNRKTNSNSYNYD 
           ____2_______________________________________________________________67__________________________________________________ 

           _______________________________________159_________________________187_________________________________________________2 
 2oaa(A) : FKIDIDWESQVVRLEVFDKQDIMIDNSVYWSFDSLQNQLDKKLKYIAVISAESKIENEKKYYKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGKKKGKTHDHGTAFRINMEKLL 
         :                                                                                                                          
 2oa9(A) : FKIDIDWESQVVRLEVFDKQDIMIDNSVYWSFDSLQNQLDKKLKYIAVISAESKIENEKKYYKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGKKKGKTHDHGTAFRINMEKLL 
           _______________________________________159_________________________187_________________________________________________2 

           39_______                                                                                                                
 2oaa(A) : EYGEVKVIV                                                                                                                
         :                                                                                                                          
 2oa9(A) : EYGEVKVIV                                                                                                                
           39_______                                                                                                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		57.8
Translation
(A) 		-0.1
Closure
(%) 		94.5
Bending Residues
( green ) 		  2 - 5
  67 - 68
  159 - 163
  187 - 189
  239 - 240
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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