Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Galactose 4-Epimerase
  Conformer 1
(PDB) 		1hzj (B)
  Conformer 2
(PDB) 		1i3n (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 189 0.72   5 - 12   15 - 48   53 - 130   136 - 137   144 - 150   152 - 184   189 - 192   250 - 255   259 - 268   311 - 316   344 - 344
2 151 0.47   13 - 14   49 - 52   131 - 135   138 - 143   151 - 151   185 - 188   193 - 249   256 - 258   269 - 310   317 - 343

Sequence


           _________12__________________________________48__52_____________________________________________________________________ 
 1hzj(B) : AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 
         :                                                                                                                          
 1i3n(A) : AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKA 
           _________12__________________________________48__52_____________________________________________________________________ 

           ______130__135_____143____150_______________________________184_188_192_________________________________________________ 
 1hzj(B) : HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 
         :                                                                                                                          
 1i3n(A) : HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 
           ______130__135_____143____150_______________________________184_188_192_________________________________________________ 

           _____249___255__________268_______________________________________310___316________________________343_____              
 1hzj(B) : IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT**              
         :                                                                                                                          
 1i3n(A) : IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQA              
           _____249___255__________268_______________________________________310___316________________________343_____              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.1
Translation
(A) 		-0.2
Closure
(%) 		98.4
Bending Residues
( green ) 		  12 - 15
  48 - 49
  52 - 53
  130 - 131
  135 - 138
  143 - 144
  150 - 152
  184 - 185
  188 - 189
  192 - 193
  249 - 250
  255 - 256
  258 - 259
  268 - 269
  310 - 311
  316 - 317
  343 - 344
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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