Ketohexokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ketohexokinase
  Conformer 1
(PDB)
2hlz (D)
  Conformer 2
(PDB)
3nbv (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 255 0.75   0 - 13   15 - 15   36 - 96   115 - 296
2 39 0.92   14 - 14   16 - 35   97 - 114

Sequence


           _____________12_____________________35______________________________________________________91___________________113____ 
 2hlz(D) : GLVPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAF-gS-aPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSL 
         :                                                                                                                          
 3nbv(B) : GLVPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSL 
           _____________12_____________________35______________________________________________________91___________________113____ 

           ________________________________________________________________________________________________________________________ 
 2hlz(D) : PDVSATDFEKVDLTQFKWIHIEGRNASEQVK-lQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDG 
         :                                                                                                                          
 3nbv(B) : PDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDG 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________                                                            
 2hlz(D) : KLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                            
         :                                                                                                                          
 3nbv(B) : KLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                            
           _____________________________________________________________                                                            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
30.4
Translation
(A)
0.3
Closure
(%)
70.1
Bending Residues
( green )
  12 - 16
  35 - 37
  91 - 97
  113 - 118
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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