Putative Outer Membrane Chaperone (Omph-Like)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Outer Membrane Chaperone (Omph-Like)
  Conformer 1
(PDB) 		4kqt (A)
  Conformer 2
(PDB) 		6fxg (A)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 41 10.92   0 - 47   110 - 117   150 - 171
2 38 6.55   54 - 91

Sequence


           ________________________________________________________________________________________47______________________________ 
 4kqt(A) : **************************************************************************LYFQGTHGPALPGVCIFSSPRAVGSSLVGKAVDARLKTIIQQVNAE 
         :                                                                                                                          
 6fxg(A) : ETTVKIASDSSYAPFEFQNGQKKWVGIDVDIMQEVAKINDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTITDERKETFDFSNPYYTSALTIATTKDSKLSDYSDLKGKAVGAKNGTAAQ 
           _______________________________________________________________________________________116______________________________ 

           ____________91__________________________________________________________________________________________________________ 
 4kqt(A) : LTGERTALDNEAKALDAKKTTIAQDALEQQAATLQAKANAWQRKGQLRQKEVEATEQKALSRVYQELNTPIQQVYQAQKCSVLLDREAVlANPAdITDAVVAALDARIKT-LTFDRERLD 
         :                                                                                                                          
 6fxg(A) : TWLQENQKKYGYTIKTYSDGVHMFAALSSGNIAGAMDEVPVISYAMKQGQDLAMNFPSISLPGGYGFAVMKGKNSTLVDGFNKALAEMKSNGDYDKILKKYGITA*************** 
           ___________160__________________________________________________________________________________________________________ 

           __                                                                                                                       
 4kqt(A) : QQ                                                                                                                       
         :                                                                                                                          
 6fxg(A) : **                                                                                                                       
           __                                                                                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		170.2
Translation
(A) 		-25.4
Closure
(%) 		98.4
Bending Residues
( green ) 		  47 - 54
  91 - 110
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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