Roundabout Homolog 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Roundabout Homolog 1
  Conformer 1
(PDB) 		2v9q (A)
  Conformer 2
(PDB) 		2v9r (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 99 0.69   66 - 164
2 94 0.69   165 - 258

Sequence


           _____________________________________________________________________________________________________164________________ 
 2v9q(A) : LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVM 
         :                                                                                                                          
 2v9r(A) : ***EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVM 
           _____________________________________________________________________________________________________164________________ 

           ________________________________________________________________________________________                                 
 2v9q(A) : VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA                                 
         :                                                                                                                          
 2v9r(A) : VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE********                                 
           ________________________________________________________________________________________                                 

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		40.3
Translation
(A) 		0.0
Closure
(%) 		53.9
Bending Residues
( green ) 		  164 - 167
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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