Ig Epsilon Chain C Region

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ig Epsilon Chain C Region
  Conformer 1
(PDB) 		1o0v (B)
  Conformer 2
(PDB) 		4ezm (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 104 0.92   436 - 472   474 - 526   530 - 543
2 100 0.87   338 - 435   473 - 473   527 - 529

Sequence


           ________________________________________________________________________________________________________________________ 
 1o0v(B) : DFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPF 
         :                                                                                                                          
 4ezm(B) : *************************************************************************************************************VSAYLSRPSPF 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________435_______________________________ 
 1o0v(B) : DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
         :                                                                                                                          
 4ezm(B) : DLFIRKSPTITCLVVD--pSKGTVQLTWSRASGKPVQHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
           ______________________________________________________________________________________435_______________________________ 

           ___472___________________________________________________526____________________                                         
 1o0v(B) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNPG                                         
         :                                                                                                                          
 4ezm(B) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP*                                         
           ___472___________________________________________________526____________________                                         

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.1
Translation
(A) 		0.5
Closure
(%) 		90.6
Bending Residues
( green ) 		  435 - 438
  472 - 474
  526 - 530
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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