Maltose/maltodextrin-Binding Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Maltose/maltodextrin-Binding Protein
  Conformer 1
(PDB) 		2xd2 (A)
  Conformer 2
(PDB) 		2xd3 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 213 0.7   147 - 303   359 - 414
2 158 0.43   44 - 146   304 - 358

Sequence


           _______________________________________________________________________________________________________146______________ 
 2xd2(A) : KELTVYVDEGYKSYIEEVAKAYEKEAGVKVTLKTGDALGGLDKLSLDNQNGNVPDVMMAPYDRVGSLGSDGQLSEVKLSDGAKTDDTTKSLVTAANGKVYGAPAVIESLVMYYNKDLVKD 
         :                                                                                                                          
 2xd3(A) : *ELTVYVDEGYKSYIEEVAKAYEKEAGVKVTLKTGDALGGLDKLSLDNQNGNVPDVMMAPYDRVGSLGSDGQLSEVKLSDGAKTDDTTKSLVTAANGKVYGAPAVIESLVMYYNKDLVKD 
           _______________________________________________________________________________________________________146______________ 

           ________________________________________________________________________________________________________________________ 
 2xd2(A) : APKTFADLENLAKDSKYAFAGEDGKTTAFLADWTNFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIVGINYAKSWYEKWPKGMQDTEGAGNLIQTQFQEGKTAAIIDGPWKAQAFKD 
         :                                                                                                                          
 2xd3(A) : APKTFADLENLAKDSKYAFAGEDGKTTAFLADWTNFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIVGINYAKSWYEKWPKGMQDTEGAGNLIQTQFQEGKTAAIIDGPWKAQAFKD 
           ________________________________________________________________________________________________________________________ 

           ___________________302__________________________________________________355_____________________________________________ 
 2xd2(A) : AKVNYGVATIPTLPNGKEYAAFGGGKAWVIPQAVKNLEASQKFVDFLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTAVIKQFKNTQPLPNISQMSAVWDPAKNMLFDAVSGQKD 
         :                                                                                                                          
 2xd3(A) : AKVNYGVATIPTLPNGKEYAAFGGGKAWVIPQAVKNLEASQKFVDFLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTAVIKQFKNTQPLPNISQMSAVWDPAKNMLFDAVSGQKD 
           ___________________302__________________________________________________355_____________________________________________ 

           ___________________                                                                                                      
 2xd2(A) : AKTAANDAVTLIKETLKQK                                                                                                      
         :                                                                                                                          
 2xd3(A) : AKTAANDAVTLIKETL***                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		26.5
Translation
(A) 		-0.3
Closure
(%) 		99.4
Bending Residues
( green ) 		  146 - 147
  302 - 306
  355 - 359
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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