Malyl-Coa Lyase/beta-Methylmalyl-Coa Lyase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Malyl-Coa Lyase/beta-Methylmalyl-Coa Lyase
  Conformer 1
(PDB) 		4roq (A)
  Conformer 2
(PDB) 		4l9y (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 254 1.32   4 - 8   13 - 268
2 56 1.75   9 - 12   269 - 320

Sequence


           __4_____________________________________________________________________________________________________________________ 
 4roq(A) : SFTLIQQATP-RLHRSELAVPGSNPTFMEKSAASKADVIFLDLEDAVAPDDKEQARKNIIQALNDLDWGNKTMMIRINGLDTHYMYRDVVDIVE-ACPRLDMILIPKVGVPADVYAIDVL 
         :                                                                                                                          
 4l9y(C) : SFRL-QPAPPARPNRCQLFGPGSRPALFEKMAASAADVINLDLEDSVAPDDKAQARANIIEAINGLDWGRKYLSVRINGLDTPFWYRDVVDLLEQAGDRLDQIMIPKVGCAADVYAVDAL 
           __4_____________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 4roq(A) : TTQIEQAKKREKKIGFEVLIETALGMANVEAIATSSKRLEAMSFGVADYAASTRARSTVIGGVNADYSVLTDKDEAGNRQTHWQDPWLFAQNRMLVACRAYGLRPIDGPFGDFSDPDGYT 
         :                                                                                                                          
 4l9y(C) : VTAIERAKGRTKPLSFEVIIESAAGIAHVEEIAASSPRLQAMSLGAADFAASMGMQTTGIGGTQENYYMLHD----G--QKHWSDPWHWAQAAIVAACRTHGILPVDGPFGDFSDDEGFR 
           ________________________________________________________________________________________________________________________ 

           __________________________268_______________________________________________________                                     
 4roq(A) : SAARRCAALGFEGKWAIHPSQIDLANEVFTPSEAEVTKARRILEAMEEAAKAGRGAVSLDGRLIDIASIRMAEALIQKADAMGG                                     
         :                                                                                                                          
 4l9y(C) : AQARRSATLGMVGKWAIHPKQVALANEVFTPSETAVTEAREILAAMDAAKARGEGATVYKGRLVDIASIKQAEVIVRQAEMIS*                                     
           __________________________263_______________________________________________________                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		28.9
Translation
(A) 		-0.1
Closure
(%) 		45.6
Bending Residues
( green ) 		  4 - 13
  268 - 269
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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