Potassium Channel

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Potassium Channel
  Conformer 1
(PDB) 		2wlo (A)
  Conformer 2
(PDB) 		2wlm (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 157 0.48   137 - 293
2 110 0.68   22 - 136

Sequence


           _____________________________________________________________________________________________________________________136 
 2wlo(A) : PRILNSDGSSNITRLGwLDDHYHDLLTVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCGMLGLAVAASLIYARFT 
         :                                                                                                                          
 2wlm(A) : ********SSNITRLGwLDDHYHDLLTVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCGMLGLAVAASLIYARFT 
           _____________________________________________________________________________________________________________________136 

           ________________________________________________________________________________________________________________________ 
 2wlo(A) : RPTAGVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEISQEGMVFRRFHDLTLTRSRSPIFSLSWTVMHPIDHHSPIYGETDETLRNSHSEFLVLFTGHHEAFAQNVHA 
         :                                                                                                                          
 2wlm(A) : RPTAGVLFSSRMVISDFEGKPTLMMRLANLRIEQIIEADVHLVLVRSEISQEGMVFRRFHDLTLTRSRSPIFSLSWTVMHPIDHHSPIYGETDETLRNSHSEFLVLFTGHHEAFAQNVHA 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________                                                                              
 2wlo(A) : RHAYSCDEIIWGGHFVDVFTTLPDGRRALDLGKFHEIAQHHHH                                                                              
         :                                                                                                                          
 2wlm(A) : RHAYSCDEIIWGGHFVDVFTTLPDGRRALDLGKFHEIAQ****                                                                              
           ___________________________________________                                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		13.2
Translation
(A) 		-0.4
Closure
(%) 		23.8
Bending Residues
( green ) 		  136 - 137
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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