Pyruvate Carboxylase N-Terminal Domain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Pyruvate Carboxylase N-Terminal Domain
  Conformer 1
(PDB) 		1ulz (A)
  Conformer 2
(PDB) 		1dv2 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 369 1.17   3 - 131   204 - 445
2 72 2.96   132 - 203

Sequence


           ________________________________________________________________________________________________________________________ 
 1ulz(A) : ***MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTDP-LDTYLNKQRIINLALEVGADAIHPGYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKA 
         :                                                                                                                          
 1dv2(A) : GSHMLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKV 
           ________________________________________________________________________________________________________________________ 

           ____________131______________________________________________________________________203________________________________ 
 1ulz(A) : RSKEVMKKAGVPVVPGSDGVL-KSLEEAKALAREIGYPVLLKATAGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQ 
         :                                                                                                                          
 1dv2(A) : SAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQ 
           ____________132______________________________________________________________________205________________________________ 

           ________________________________________________________________________________________________________________________ 
 1ulz(A) : KLVEIAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQEGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGEPLTIKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIE 
         :                                                                                                                          
 1dv2(A) : KVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFEN-GEFYFIKMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPN-TFLPSPGKIT 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________                         
 1ulz(A) : RYYVPGGFGIRVEHAAARGFEVTPYYDSMIAKLITWAPTWDEAVERMRAALETYEITGVKTTIPLLINIMKEKDFKAGKFTTKYLEEHPEVFEYEE                         
         :                                                                                                                          
 1dv2(A) : RFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ****                         
           ________________________________________________________________________________________________                         

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		54.1
Translation
(A) 		1.3
Closure
(%) 		98.2
Bending Residues
( green ) 		  131 - 132
  203 - 204
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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