Thermosome

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Thermosome
  Conformer 1
(PDB) 		1asx  
  Conformer 2
(PDB) 		1a6d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 116 1.07   3 - 35   68 - 150
2 25 2.44   43 - 67

Sequence


           ________________________________________________________________________________________________________________________ 
 1asx    : ************************************************************************************************************************ 
         :                                                                                                                          
 1a6d(A) : REQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARK 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________________________31_____________ 
 1asx    : ****************************************************************************MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQI 
         :                                                                                                                          
 1a6d(A) : IIDEIAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQI 
           ________________________________________________________________________________________________________243_____________ 

           _____________________67_________________________________________________________________________________________________ 
 1asx    : SDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCK************ 
         :                                                                                                                          
 1a6d(A) : SDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGG 
           ____________________279_________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1asx    : ************************************************************************************************************************ 
         :                                                                                                                          
 1a6d(A) : TDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLR 
           ________________________________________________________________________________________________________________________ 

           _______________________                                                                                                  
 1asx    : ***********************                                                                                                  
         :                                                                                                                          
 1a6d(A) : VKTHALESAVEVATMILRIDDVI                                                                                                  
           _______________________                                                                                                  

Morph
Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		26.6
Translation
(A) 		1.1
Closure
(%) 		85.0
Bending Residues
( green ) 		  31 - 45
  67 - 68
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download