Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Galactose 4-Epimerase
  Conformer 1
(PDB) 		1ek6 (B)
  Conformer 2
(PDB) 		4twr (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 273 1.9   4 - 141   144 - 222   240 - 276   281 - 293   309 - 320   327 - 339
2 40 1.52   142 - 143   223 - 239   277 - 280   294 - 308   325 - 326

Sequence


           ________________________________________________________________________________________________________________________ 
 1ek6(B) : AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 
         :                                                                                                                          
 4twr(A) : ANNVLVVGGAGFIGSHTAKLLAGQGYAPVVYDNLSTGHQSAV--------------RWGDFVEGDILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRL 
           ________________________________________________________________________________________________________________________ 

           _________________141________________________________________________________________________________222______________239 
 1ek6(B) : HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGE--DPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 
         :                                                                                                                          
 4twr(A) : TRTQNVIFSSSCATYGVPSRLPIGEGEAQNP-INPYGRTKLIAEHMLADYAVA-YGLRYVALRYFNASGADIDGELGEKHDPE---THLIPRAMMAAAGRLDVLEVYGDDYETPDGTCIR 
           _________________128________________________________________________________________________________206______________223 

           __________________________________276_280__________293____________308_________320___________________________             
 1ek6(B) : DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGW-TAALGLDRMCEDLWRWQKQNPSGFGT             
         :                                                                                                                          
 4twr(A) : DYIHVTDLARAHVLAVEHLKEAGGNLAVNLGTGRGTSIREIVQSIGRLTGRSVPVAMRARRAGDPPALYADPALAAEKLGFHTVYSDLDTIIRTAAPHFGLEVR****             
           __________________________________260_264__________277____________292_________304___________________________             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		19.3
Translation
(A) 		-0.1
Closure
(%) 		87.8
Bending Residues
( green ) 		  141 - 144
  222 - 223
  239 - 240
  276 - 277
  280 - 281
  293 - 296
  308 - 309
  320 - 327
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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