Glyoxylate Reductase/hydroxypyruvate Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glyoxylate Reductase/hydroxypyruvate Reductase
  Conformer 1
(PDB) 		2cuk (A)
  Conformer 2
(PDB) 		2dbq (A)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 190 1.24   99 - 292
2 106 1.17   5 - 98   293 - 307

Sequence


           __________________________________________________________________________________________________98____________________ 
 2cuk(A) : *MRVLVTRTLPGKALDRLRERGLEVEVHRGL-FLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVV 
         :                                                                                                                          
 2dbq(A) : KPKVFITREIPEVGI-KlEDE-FEVEVWGDEKEIPREILLKKVKEVDALV-TlSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVV 
           _________________________________________________________________________________________________100____________________ 

           ________________________________________________________________________________________________________________________ 
 2cuk(A) : EGAAYARDGLWK----AWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKP-----LPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTA 
         :                                                                                                                          
 2dbq(A) : KGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFN-rILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERL-KLkKTAILINIA 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________292______________________________                           
 2cuk(A) : RGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPVV***********                           
         :                                                                                                                          
 2dbq(A) : RGKVVDTNALVKALKEGWIAGAGLDVFEEEPYY-NEELFKLDNVVLTPHIGSASFGAREG-aELVAKNLIAFKRGEIPPTLVNREVIKIRKPGF                           
           _____________________________________________________________303______________________________                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.7
Translation
(A) 		0.5
Closure
(%) 		98.4
Bending Residues
( green ) 		  98 - 99
  292 - 293
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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