44K Atpase Fragment (N-Terminal) Of 7O Kd Heat- Shock Cognate Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 44K Atpase Fragment (N-Terminal) Of 7O Kd Heat- Shock Cognate Protein
  Conformer 1
(PDB) 		1hpm (A)
  Conformer 2
(PDB) 		3d2f (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 290 0.98   6 - 228   313 - 379
2 84 0.56   229 - 312

Sequence


           ________________________________________________________________________________________________________________________ 
 1hpm(A) : GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 
         :                                                                                                                          
 3d2f(B) : AAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMV 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________222_____________________ 
 1hpm(A) : LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 
         :                                                                                                                          
 3d2f(B) : LTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVE 
           ________________________________________________________________________________________________222_____________________ 

           ________________________________________________________________310_____________________________________________________ 
 1hpm(A) : EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 
         :                                                                                                                          
 3d2f(B) : EFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSI 
           ________________________________________________________________310_____________________________________________________ 

           ___________________                                                                                                      
 1hpm(A) : NPDEAVAYGAAVQAAILS*                                                                                                      
         :                                                                                                                          
 3d2f(B) : NPDEAVAYGAAVQAAILMG                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		27.0
Translation
(A) 		-0.5
Closure
(%) 		99.6
Bending Residues
( green ) 		  222 - 236
  310 - 313
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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