Kinesin Light Chain 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Kinesin Light Chain 2
  Conformer 1
(PDB) 		3zfw (B)
  Conformer 2
(PDB) 		3ceq (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 38 0.61   272 - 274   280 - 282   287 - 313   323 - 327
2 42 0.43   239 - 271   275 - 279   283 - 286
3 138 0.66   314 - 322   328 - 475

Sequence


           __________________________________________________________271_____279____286________________________313______322__327___ 
 3zfw(B) : *************************HPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNL 
         :                                                                                                                          
 3ceq(A) : LVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNL 
           __________________________________________________________271_____279____286________________________313______322__327___ 

           ________________________________________________________________________________________________________________________ 
 3zfw(B) : ALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGENKPIWMHAEEREESkACKVDSPTVNTTLRSLGALYRRQGKLEA 
         :                                                                                                                          
 3ceq(A) : ALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESkACK--sPTVNTTLRSLGALYRRQGKLEA 
           ________________________________________________________________________________________________________________________ 

           ____________                                                                                                             
 3zfw(B) : AHTLEDCASR**                                                                                                             
         :                                                                                                                          
 3ceq(A) : AHTLEDCASRNR                                                                                                             
           ____________                                                                                                             

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.6
Translation
(A) 		0.4
Closure
(%) 		99.2
Bending Residues
( green ) 		  271 - 272
  274 - 275
  279 - 280
  282 - 283
  286 - 287
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		13.0
Translation
(A) 		0.2
Closure
(%) 		98.2
Bending Residues
( green ) 		  313 - 314
  322 - 323
  327 - 328
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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