O-Acetylserine Sulfhydrylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name O-Acetylserine Sulfhydrylase
  Conformer 1
(PDB) 		1d6s (A)
  Conformer 2
(PDB) 		1z7w (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 247 1.77   4 - 64   72 - 87   104 - 106   141 - 141   143 - 316
2 49 0.86   65 - 71   88 - 103   107 - 131   142 - 142

Sequence


           _________________________________________________________________64___68_________________87_____________103_____________ 
 1d6s(A) : SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVACRIGANMIWDAEKRGVLKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGA 
         :                                                                                                                          
 1z7w(A) : SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 
           _________________________________________________________________70___74_________________93_____________109_____________ 

           ____________131_________________________________________________________________________________________________________ 
 1d6s(A) : KGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPG 
         :                                                                                                                          
 1z7w(A) : KGMKGAIAKAEEILAKTPNGYML-QQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKL--YGVEPVESAI----LSGG--KPGPHKIQGIGAGFIPS 
           ____________137_________________________________________________________________________________________________________ 

           _________________________________________________________________________________________                                
 1d6s(A) : NLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ***                                
         :                                                                                                                          
 1z7w(A) : VLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA                                
           _________________________________________________________________________________________                                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		15.3
Translation
(A) 		-0.1
Closure
(%) 		95.8
Bending Residues
( green ) 		  64 - 65
  68 - 72
  87 - 88
  103 - 104
  106 - 107
  131 - 143
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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