Phosphoserine Phosphatase (Psp)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoserine Phosphatase (Psp)
  Conformer 1
(PDB) 		1f5s (A)
  Conformer 2
(PDB) 		1l70 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 43 8.88   138 - 141   159 - 197
2 39 10.85   116 - 137   142 - 158

Sequence


           ________________________________________________________________________________________________________________________ 
 1f5s(A) : EKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN 
         :                                                                                                                          
 1l70(A) : *******************************************************************************MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNA 
           ________________________________________________________________________________________________________________________ 

           _____________137_141_______________158__________________________________________________________________________________ 
 1f5s(A) : RLIVKDGKLTGDVEGEVLKENAKGE-ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYIK***************************** 
         :                                                                                                                          
 1l70(A) : AKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAAALAKSRWYNQTPNRAKRVITTFRTGTWDA- 
           ______________57__61________________79__________________________________________________________________________________ 

           _____                                                                                                                    
 1f5s(A) : *****                                                                                                                    
         :                                                                                                                          
 1l70(A) : ---YK                                                                                                                    
           _____                                                                                                                    

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		82.6
Translation
(A) 		-4.0
Closure
(%) 		77.2
Bending Residues
( green ) 		  137 - 138
  141 - 142
  158 - 160
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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