Predicted Glycosyltransferases

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Predicted Glycosyltransferases
  Conformer 1
(PDB) 		3c48 (A)
  Conformer 2
(PDB) 		3c4v (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 196 0.38   3 - 196   391 - 407
2 182 0.72   197 - 390

Sequence


           ________________________________________________________________________________________________________________________ 
 3c48(A) : SHMRVAMISMHTSPLQQ-------gMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGW 
         :                                                                                                                          
 3c4v(A) : **MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGW 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________195_______________________________________________ 
 3c48(A) : LLRDLWRIPLIHTAHTLAAVKNSYdTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPG----tERSRRELGIPLHTKVVAFVGRLQPFKGPQVLI 
         :                                                                                                                          
 3c4v(A) : LLRDLWRIPLIHTAHTLAAV----dTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLI 
           ______________________________________________________________________195_______________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3c48(A) : KAVAALFDRDPDRNLRVIICGGPSdTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL 
         :                                                                                                                          
 3c4v(A) : KAVAALFDRDPDRNLRVIICGGP--tYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL 
           ________________________________________________________________________________________________________________________ 

           _______________386________________________________                                                                       
 3c48(A) : LDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETHHG                                                                       
         :                                                                                                                          
 3c4v(A) : LDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE*********                                                                       
           _______________386________________________________                                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		97.4
Translation
(A) 		0.0
Closure
(%) 		39.5
Bending Residues
( green ) 		  195 - 197
  386 - 392
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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