Protein Hi0146

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein Hi0146
  Conformer 1
(PDB)
2cex (C)
  Conformer 2
(PDB)
2cey (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 161 0.73   4 - 81   87 - 127   211 - 256
2 122 0.22   82 - 86   128 - 210   257 - 290

Sequence


           _______________________________________________________________________________81_______________________________________ 
 2cex(C) : *DYDLKFGMNAGTSSNEYKAAEMFAKEVKEK----iEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLS 
         :                                                                                                                          
 2cey(A) : ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLS 
           _______________________________________________________________________________81_______________________________________ 

           ____127________________________________________________________________________________210______________________________ 
 2cex(C) : QAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAEN 
         :                                                                                                                          
 2cey(A) : QAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAEN 
           ____127________________________________________________________________________________210______________________________ 

           _____________256__________________________________________________                                                       
 2cex(C) : AAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAIN*                                                       
         :                                                                                                                          
 2cey(A) : AAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAINP                                                       
           _____________256__________________________________________________                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.6
Translation
(A)
-0.2
Closure
(%)
81.2
Bending Residues
( green )
  81 - 87
  127 - 128
  210 - 211
  256 - 257
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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