Splicing Factor, Proline- And Glutamine-Rich

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Splicing Factor, Proline- And Glutamine-Rich
  Conformer 1
(PDB) 		4wii (A)
  Conformer 2
(PDB) 		4wii (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 181 0.66   287 - 467
2 58 0.82   468 - 525

Sequence


           ________________________________________________________________________________________________________________________ 
 4wii(A) : EGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFG 
         :                                                                                                                          
 4wii(B) : *********LRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFG 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________461______________________________________________________ 
 4wii(A) : PIERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 
         :                                                                                                                          
 4wii(B) : PIERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 
           _______________________________________________________________461______________________________________________________ 

           ______________                                                                                                           
 4wii(A) : KDKLESEMEDAYH*                                                                                                           
         :                                                                                                                          
 4wii(B) : KDKLESEMEDAYHE                                                                                                           
           ______________                                                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.0
Translation
(A) 		0.0
Closure
(%) 		59.4
Bending Residues
( green ) 		  461 - 478
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download