Tryptophanyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Tryptophanyl-Trna Synthetase
  Conformer 1
(PDB) 		1i6k (A)
  Conformer 2
(PDB) 		1maw (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 168 1.39   32 - 61   68 - 174   287 - 324
2 144 1.68   4 - 31   62 - 67   175 - 286

Sequence


           _____________________________31____________________________61____67_____________________________________________________ 
 1i6k(A) : *KTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAW-lQCIVYIGELER-tQFKEKSAGKEAVSA 
         :                                                                                                                          
 1maw(A) : MKTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGKEAVSA 
           _____________________________31____________________________61____67_____________________________________________________ 

           ___________________________________________________174__________________________________________________________________ 
 1i6k(A) : GLLTYPPL-aADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVGARI-sLVDPTKK-sKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISN 
         :                                                                                                                          
 1maw(A) : GLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISN 
           ___________________________________________________174__________________________________________________________________ 

           ___________________________________________286________________________________________                                   
 1i6k(A) : LLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHW-eSEELDRVLDEGAEKANRVASE-vRK-eQA-gLGR                                   
         :                                                                                                                          
 1maw(A) : LLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGLGR                                   
           ___________________________________________286________________________________________                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		13.6
Translation
(A) 		-0.9
Closure
(%) 		94.7
Bending Residues
( green ) 		  31 - 32
  61 - 62
  67 - 68
  174 - 175
  286 - 287
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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