Udp-N-Acetylglucosamine 2-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-N-Acetylglucosamine 2-Epimerase
  Conformer 1
(PDB) 		3beo (A)
  Conformer 2
(PDB) 		1f6d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 187 1.27   8 - 184   352 - 352   354 - 367
2 165 3.99   185 - 351   353 - 353

Sequence


           ________________________________________________________________________________________________________________________ 
 3beo(A) : GPVDMTERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQI 
         :                                                                                                                          
 1f6d(A) : *********KVLTVFGTRPEAIK-aPLVHALAKDPF-FEAKVCVTAQHRE-lDQVLKLFSIVPDYDLNI-qPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRI 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________183_____________________________________________________ 
 3beo(A) : PVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNN-------RLVLMTAHRRENLGEPMRNMFRAIKRLV 
         :                                                                                                                          
 1f6d(A) : PVGHVEAGLRTGDLYSPWPEEANRTLTGHLA-yHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVsSDKLRSELAANYPFIDPDKKiLVTGHRRESFGRGFEEICHALADIA 
           ________________________________________________________________178_____________________________________________________ 

           _______________________________________________________________________________________________________________________3 
 3beo(A) : DKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSGGVQEEAPSLGVPVLVLRDTTERPEGIEAGTLKLAGTDEETIFSLADELLSDKEAHDKMSKAS 
         :                                                                                                                          
 1f6d(A) : TTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLn-HAWLILTDSGGIQEEAPSLGKPVLV-rDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEY-QAsRAH 
           _______________________________________________________________________________________________________________________3 

           51_____________________                                                                                                  
 3beo(A) : NPYGDGRASERIVEAILKHFNK*                                                                                                  
         :                                                                                                                          
 1f6d(A) : NPYGDGQACSRILEALKNNRISL                                                                                                  
           55_____________________                                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		28.6
Translation
(A) 		-1.0
Closure
(%) 		92.2
Bending Residues
( green ) 		  183 - 185
  351 - 354
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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