Methyltransferase Mppj

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Methyltransferase Mppj
  Conformer 1
(PDB) 		4kif (A)
  Conformer 2
(PDB) 		4kic (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 177 0.53   6 - 143   244 - 245   274 - 306   325 - 328
2 153 0.61   144 - 243   246 - 273   307 - 324   329 - 335

Sequence


           ________________________________________________________________________________________________________________________ 
 4kif(A) : TEVSEAQARRAVADIFNSTLASSAIGAAWELGALDELRENGKLDVSDFAVRHDLHEPAVVGMFTALASVGIVRREGATVVVGPYFDEANHHRSLFHWLNQGSGELFRRMPQVLPNENRTG 
         :                                                                                                                          
 4kic(A) : *EVSEAQARRAVADIFNSTLASSAIGAAWELGALDELRENGKLDVSDFAVRHDLHEPAVVGMFTALASVGIVRREGATVVVGPYFDEANHHRSLFHWLNQGSGELFRRMPQVLPNENRTG 
           ________________________________________________________________________________________________________________________ 

           __________________143_________________________________________________________________________________________________24 
 4kif(A) : KFYQRDAGAISYACREISERYFDPAFWAAVDGLGYTPTTVADLGSGSGERLIQIARRFPGVRGLGVDIADGAIAMAEKEVAAKGFGDQISFVRGDARTIDQVSARGEFAEVDLLTCFMMG 
         :                                                                                                                          
 4kic(A) : KFYQRDAGAISYACREISERYFDPAFWAAVDGLGYTPTTVADLGSGSGERLIQIARRFPGVRGLGVDIADGAIAMAEKEVAAKGFGDQISFVRGDARTIDQVSARGEFAEVDLLTCFMMG 
           __________________143_________________________________________________________________________________________________24 

           3___________________________273______________________________306_______________324_____________                          
 4kif(A) : HDFWPRENCVQTLRKLRAAFPNVRRFLLGDATRTVGIPDRELPVFTLGFEFGHDMMGVYLPTLDEWDGVFEEGGWRCVKKHAIDSLSVSVVFELE                          
         :                                                                                                                          
 4kic(A) : HDFWPRENCVQTLRKLRAAFPNVRRFLLGDATRTVGIPDRELPVFTLGFEFGHDMMGVYLPTLDEWDGVFEEGGWRCVKKHAIDSLSVSVVFELE                          
           3___________________________273______________________________306_______________324_____________                          

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.5
Translation
(A) 		-0.6
Closure
(%) 		95.3
Bending Residues
( green ) 		  143 - 144
  243 - 246
  273 - 274
  306 - 307
  324 - 330
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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