Mg2+ Transporter Mgte

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Mg2+ Transporter Mgte
  Conformer 1
(PDB) 		2yvy (A)
  Conformer 2
(PDB) 		2yvz (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 125 1.51   7 - 131
2 115 1.08   132 - 250

Sequence


           ______________________________________________________________________________________________________________________12 
 2yvy(A) : LAVSLQEALQEGDTRALREVLEEIHPQDLLALWDELKGEHRYVVLTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVE 
         :                                                                                                                          
 2yvz(A) : LAVSLQEALQEGDTRALREVLEEIHPQDLLALWDELKGEHRYVVLTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVE 
           ______________________________________________________________________________________________________________________12 

           5_______________________________________________________________________________________________________________________ 
 2yvy(A) : ALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVT 
         :                                                                                                                          
 2yvz(A) : ALARYEEDEAGGL-tPEYVAVREG-tVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTRVAEI-nPKVVYVRTDTDQEEVARL-aDYDFTVLPVVDEEGRLVGIVT 
           5_______________________________________________________________________________________________________________________ 

           ________                                                                                                                 
 2yvy(A) : VDDVLDVL                                                                                                                 
         :                                                                                                                          
 2yvz(A) : VDDVLDVL                                                                                                                 
           ________                                                                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		117.3
Translation
(A) 		-4.5
Closure
(%) 		67.8
Bending Residues
( green ) 		  125 - 133
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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